BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A08LP1|AL426138
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1488 1588 0.0
>3x_Contig1488
Length = 9807
Score = 1588 bits (801), Expect = 0.0
Identities = 804/805 (99%)
Strand = Plus / Plus
Query: 1 tctgccgtaggtatttattcaacgtttcctcagatgcagtctctctcaatgccacctcca 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5795 tctgcggtaggtatttattcaacgtttcctcagatgcagtctctctcaatgccacctcca 5854
Query: 61 atattcttcgaaggtcttttggcacatcgccaagatccgaaatatcaattctagcatggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5855 atattcttcgaaggtcttttggcacatcgccaagatccgaaatatcaattctagcatggg 5914
Query: 121 taaaatgtctactgactaacttgaaatcattacccaattgaacatacacatcggaaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5915 taaaatgtctactgactaacttgaaatcattacccaattgaacatacacatcggaaacat 5974
Query: 181 tacgctcggtaactttgcccttggaccattgcgtcagaatttgtaatagttgtttagttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5975 tacgctcggtaactttgcccttggaccattgcgtcagaatttgtaatagttgtttagttg 6034
Query: 241 aaatcaatagtttcgtcacactagtttccacagatgatgctgatttagaaattggtggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6035 aaatcaatagtttcgtcacactagtttccacagatgatgctgatttagaaattggtggtg 6094
Query: 301 gtgtttccatctttatcagacacaccttacgtacctcaccctactgcttccacacaccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6095 gtgtttccatctttatcagacacaccttacgtacctcaccctactgcttccacacaccta 6154
Query: 361 actactagctaggaaatccaacgtacactttttaaacggtatgtttcttcaaagcattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6155 actactagctaggaaatccaacgtacactttttaaacggtatgtttcttcaaagcattac 6214
Query: 421 tagatcaaaaagctttaggtttgatttggtttgcataaatcttttgttgataaatatcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6215 tagatcaaaaagctttaggtttgatttggtttgcataaatcttttgttgataaatatcaa 6274
Query: 481 gaaacgtaatttcctgaagttaggccgagataatgaaacaggaaagtatggaaacttacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6275 gaaacgtaatttcctgaagttaggccgagataatgaaacaggaaagtatggaaacttacc 6334
Query: 541 atttcagaagctaagcaaccaacagagacgtgttaccgcgtatgacatatagcgtggttt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6335 atttcagaagctaagcaaccaacagagacgtgttaccgcgtatgacatatagcgtggttt 6394
Query: 601 ctgtgggatgaatcaggactctgtagtccccaattcggaggctagtgatgaagagatcgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6395 ctgtgggatgaatcaggactctgtagtccccaattcggaggctagtgatgaagagatcgt 6454
Query: 661 aatacctctgcattcggaaccaaatgtatttccaatcttcgatgacgaataccaggtacg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455 aatacctctgcattcggaaccaaatgtatttccaatcttcgatgacgaataccaggtacg 6514
Query: 721 cgtcattccgggcagtctcgataacgtagcacagacacctcctgatattggagtttactc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6515 cgtcattccgggcagtctcgataacgtagcacagacacctcctgatattggagtttactc 6574
Query: 781 taatagtataagacgtgcattgaga 805
|||||||||||||||||||||||||
Sbjct: 6575 taatagtataagacgtgcattgaga 6599
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5784
Number of Sequences: 1807
Number of extensions: 5784
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)